Man

Gonzalo - Riadi Mahias

Assistant Professor

Universidad de Talca

Talca, Chile

Líneas de Investigación


Role of Transposable Elements in Regeneration, Ageing, Diseases, in the Molecular biology of the cell and Evolution. Prediction of expressed Transposable Elements;

Educación

  •  Bioinformatics, UNIVERSIDAD ANDRES BELLO. Chile, 2012
  •  Biotechnology Engineer, UNIVERSIDAD DE CHILE. Chile, 2000

Experiencia Académica

  •   Assistant Professor Full Time

    UNIVERSIDAD DE TALCA

    Engineering

    Talca, Chile

    2004 - A la fecha

Premios y Distinciones

  •   Dr. Gonzalo Riadi

    UNIVERSIDAD DE TALCA

    Chile, 2018

    Teaching innovation prize 2018, for the implementation of a web server to teach modeling with Hidden Markov Models in a friendly way such that the student does not need to know programing or algorithms.


 

Article (23)

Bioinformatic analysis predicts that ethanol exposure during early development causes alternative splicing alterations of genes involved in RNA post-transcriptional regulation

Fuentes-Beals, Camilo; Olivares-Costa, Montserrat; Andres, Maria Estela; Haeger, Paola A.; Riadi, Gonzalo; Oliva, Carlos; Faunes, Fernando

Article ISI
PLOS ONE  (2023)

Extracellular Vesicles Secreted by Pre-Hatching Bovine Embryos Produced In Vitro and In Vivo Alter the Expression of IFNtau-Stimulated Genes in Bovine Endometrial Cells

Aguilera, Constanza; Estela Velasquez, Alejandra; Angel Gutierrez-Reinoso, Miguel; Wong, Yat Sen; Melo-Baez, Barbara; Cabezas, Joel; Caamano, Diego; Navarrete, Felipe; Rojas, Daniela; Riadi, Gonzalo; Castro, Fidel Ovidio; Rodriguez-Alvarez, Llretny

Article ISI
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES  (2023)

Bovine embryos release extracellular vesicles with differential miRNA signature during the compaction and blastulation stages

Melo-Baez, Barbara; Mellisho, Edwin A.; Wong, Yat S.; Cabezas, Joel; Caamano, Diego; Aguilera, Constanza; Riadi, Gonzalo; Castro, Fidel O.; Rodriguez-Alvarez, Lleretny

Article ISI
REPRODUCTIVE BIOLOGY  (2022)

Hidden Markov Model<i>ing</i> with HMMTeacher

Fuentes-Beals, Camilo; Valdes-Jimenez, Alejandro; Riadi, Gonzalo

Article ISI
PLOS COMPUTATIONAL BIOLOGY  (2022)

Lymph Leakage Promotes Immunosuppression by Enhancing Anti-Inflammatory Macrophage Polarization

Herrada, Andres A.; Olate-Briones, Alexandra; Lazo-Amador, Rodrigo; Liu, Chaohong; Hernandez-Rojas, Bairon; Riadi, Gonzalo; Escobedo, Noelia

Article ISI
FRONTIERS IN IMMUNOLOGY  (2022)

How to Grow a Tree: Plant Voltage-Dependent Cation Channels in the Spotlight of Evolution

Dreyer, Ingo; Sussmilch, Frances C.; Fukushima, Kenji; Riadi, Gonzalo; Becker, Dirk; Schultz, Joerg; Hedrich, Rainer

Article ISI
TRENDS IN PLANT SCIENCE  (2021)

Distinctive Cellular Transcriptomic Signature and MicroRNA Cargo of Extracellular Vesicles of Horse Adipose and Endometrial Mesenchymal Stem Cells from the Same Donors

Navarrete, Felipe; Wong, Yat Sen; Cabezas, Joel; Riadi, Gonzalo; Manriquez, Jose; Rojas, Daniela; Furlanetto Mancanares, Ana Carolina; Rodriguez-Alvarez, Lleretny; Saravia, Fernando; Castro, Fidel Ovidio

Article ISI
CELLULAR REPROGRAMMING  (2020)

MicroRNAs from Extracellular Vesicles Secreted by Bovine Embryos as Early Biomarkers of Developmental Competence

Melo-Baez, Barbara; Wong, Yat S.; Aguilera, Constanza J.; Cabezas, Joel; Mancanares, Ana C. F.; Riadi, Gonzalo; Castro, Fidel O.; Rodriguez-Alvarez, Lleretny

Article ISI
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES  (2020)

Mitochondrial acetyl-CoA reversibly regulates locus-specific histone acetylation and gene expression

Lozoya O.A.; Wang T.; Grenet D.; Wolfgang T.C.; Sobhany M.; Ganini da Silva D.; Riadi G.; Chandel N.; Woychik R.P.; Santos J.H.

Article SCOPUS
Life science alliance  (2019)

TEcandidates: Prediction of genomic origin of expressed transposable elements using RNA-seq data

Valdebenito-Maturana B.; Riadi G.

Article ISI SCOPUS
Bioinformatics  (2018)

Predicting the stability of human lysozyme mutants using the tree-based classifier TTOSOM

Maldonado, Gonzalo; Astudillo, C?sar A.; Riadi, Gonzalo; Caballero, Julio

Article
CHEMOMETRICS AND INTELLIGENT LABORATORY SYSTEMS  (2017)

The receptor-like pseudokinase MRH1 interacts with the voltage-gated potassium channel AKT2

Sklodowski, Kamil; Riedelsberger, Janin; Raddatz, Natalia; Riadi, Gonzalo; Caballero, Julio; Ch?rel, Isabelle; Schulze, Waltraud; Graf, Alexander; Dreyer, Ingo

Article ISI SCOPUS
SCIENTIFIC REPORTS  (2017)

A Novel Analytical Strategy to Identify Fusion Transcripts between Repetitive Elements and Protein Coding-Exons Using RNA-Seq

Wang, TY; Santos, JH; Feng, J; Fargo, DC; Shen, L; Riadi, G; Keeley, E; Rosh, ZS; Nestler, EJ; Woychik, RP

Article ISI SCOPUS
PLOS ONE  (2016)

Towards the bridging of molecular genetics data across Xenopus species

Riadi G.; Ossandon F; Larrain, J; Melo F.

Article ISI SCOPUS
BMC GENOMICS  (2016)

Novel missense mutation of the FAM83H gene causes retention of amelogenin and a mild clinical phenotype of hypocalcified enamel

Urzua, B.; Martínez C; Ortega-Pinto, A; Adorno, D; Morales-Bozo, I; Riadi G.; Jara, L; Plaza, A; Lefimil, C; Lozano, C; Reyes, M

Article ISI SCOPUS
Archives of Oral Biology  (2015)

Easy identification of residues involved on structural differences between nonphosphorylated and phosphorylated cdk2cyclin a complexes using two-dimensional networks

Riadi G.; Caballero J.

Article SCOPUS
MOLECULAR INFORMATICS  (2014)

Architecture and Gene Repertoire of the Flexible Genome of the Extreme Acidophile Acidithiobacillus caldus

Acuña LG; Cardenas, JP; Covarrubias PC; Haristoy JJ; Flores R.; Núñez H; Riadi G.; Shmaryahu, A; Valdés J.; Dopson, M; Rawlings DE; Banfield, JF; Holmes, DS; Quatrini, R

Article ISI SCOPUS
PLOS ONE  (2013)

TnpPred: AWeb Service for the Robust Prediction of Prokaryotic Transposases

Riadi G.; Medina-Moenne C.; Holmes, D.S.

Article ISI SCOPUS
Comparative and Functional Genomics  (2012)

Mapping the Landscape of Host-Pathogen Coevolution: HLA Class I Binding and Its Relationship with Evolutionary Conservation in Human and Viral Proteins

Hertz T.; Huang J.C.; Riadi G.; Jojic N.; Nolan D.; James I.; John, M; Gaudieri S.; Phillips E.; Mallal S.

Article ISI SCOPUS
Journal of Virology  (2011)

Loss of TP53-DNA interaction induced by p.C135R in lung cancer

Aranda, M; Gonzalez-Nilo, F; Riadi G.; Díaz V.; Perez J.; Martel, G; Hainaut, P; Mimbacas, A

Article ISI SCOPUS
ONCOLOGY REPORTS  (2007)

Histidine triad-like motif of the rotavirus NSP2 octamer mediates both RTPase and NTPase activities

Carpio, RVD; Gonzalez-Nilo, FD; Riadi G.; Taraporewala, ZF; Patton, JT

Article ISI SCOPUS
JOURNAL OF MOLECULAR BIOLOGY  (2006)

Molecular dynamics simulation of the aqueous solvation shell of cellulose and xanthate ester derivatives

Humeres, E; Mascayano, C; Riadi G.; Gonzalez-Nilo, F

Article ISI SCOPUS
JOURNAL OF PHYSICAL ORGANIC CHEMISTRY  (2006)

Large-scale, multi-genome analysis of alternate open reading frames in bacteria and archaea

Veloso F.; Riadi G.; Aliaga, D.; Lieph, R; Holmes, DS

Article ISI SCOPUS
OMICS-A JOURNAL OF INTEGRATIVE BIOLOGY  (2005)

Proyecto (3)

Understanding Allelic Diversity of Genes that Control Color Patterns in the Flower Tepals of the Chilean Alstroemeria Species.

Gonzalo Riadi; Pérez, José Ricardo; Gebauer, Marlene

Proyecto
 (2023)

RELATIONSHIP BETWEEN TRANSPOSABLE ELEMENTS AND NON-CODING RNAS IN REGULATING GENE EXPRESSION IN XENOPUS LAEVIS

FONDECYT (11140869)

Proyecto
2015-2017
Inv. Principal

PREDICTION AND ANALYSIS OF PIRNAS DERIVED FROM CLASS II MOBILE ELEMENTS IN XENOPUS SPECIES GENOMES.

FONDECYT (3130441)

Proyecto
2012-2014
Inv. Responsable

Review (1)

K-2P channels in plants and animals

González, Wendy; Valdebenito, Braulio; Caballero, Julio; Riadi, Gonzalo; Riedelsberger, Janin; Martínez, Gonzalo; Ramirez, David; Zúñiga, Leandro; Sepúlveda, Francisco V.; Dreyer, Ingo; Janta, Michael; Becker, Dirk

Review ISI SCOPUS
Pflugers Archiv European Journal of Physiology  (2015)

24
Gonzalo Riadi

Assistant Professor

Bioinformatics

Universidad de Talca

Talca, Chile

3
Ingo Dreyer

Professor Titular

Bioinformatica

Universidad de Talca

Talca, Chile

3
Yat Wong

Estudiante de Doctorado

Ciencias Pecuarias

Universidad de Concepción

Chile, Chile

3
Fernando Gonzalez

Titular Professor

Facultad de Ciencias de la Vida

Universidad Andres Bello

Santiago, Chile

3
David Holmes

Head, Laboratory of Bioinformatics and Genome Biology

Center for Bioinformatics and Genome Biology

FUNDACION CIENCIA & VIDA

Santiago, Chile

2
Braulio Valdebenito

.

.

.

TALCA, Chile

2
Julio Caballero

Full Professor

Departamento de Bioinformática

Universidad de Talca

Talca, Chile

1
María Andrés

Full Professor

Cellular and Molecular Biology

PONTIFICIA UNIVERSIDAD CATÓLICA DE CHILE

Santiago, Chile

1
Carlos Oliva

Profesor Asociado

Biología Celular y Molecular

Pontificia Universidad Católica de Chile

Santiago, Chile

1
Andres Herrada

Principal Investigator

Instituto de Ciencias Biomédicas

Universidad Autónoma de Chile

Talca, Chile

1
RODRIGO FLORES

Investigador

Biología Celular y Molecular

Universidad de Chile

Macul, Chile

1
Paulo Covarrubias

Profesional

Genética Molecular

Instituto de Salud Pública

Santiago, Chile

1
Noelia Escobedo

Profesor Asistente

Facultad de Ciencias de la Salud

Universidad Autónoma de Chile

Talca, Chile

1
Juan Cardenas

Assistant Professor

Universidad Mayor de Chile

Santiago, Chile

1
fernando saravia

Profesor Asociado

Ciencia Animal

UNIVERSIDAD DE CONCEPCIÓN

Chillán, Chile

1
Cristóbal Medina

CEO

Lircaytech

Santiago, Chile

1
Francisco Sepúlveda

Research

Laboratorio Biología Molecular

CENTRO DE ESTUDIOS CIENTÍFICOS (CECS)

Valdivia, Chile

1
FELIPE NAVARRETE

Profesor Asistente

Ciencia Animal

Universidad de Concepción

Chillán, Chile

1
Anita Plaza

Investigador

Medicina

Universidad Austral de Chile

Valdivia, Chile

1
Victor Diaz

Profesional

Universidad San Sebastian

Concención, Chile

1
David Ramirez

Profesor Asistente

Facultad de Ciencias Biológicas

Universidad de Concepción

Concepcion, Chile

1
Raquel Quatrini

Research Associate

Fundación Ciencia & Vida

Santiago, Chile

1
Claudia Lefimil

Profesor Asistente

Instituto de Investigación en Ciencias odontológicas

UNIVERSIDAD DE CHILE

Santiago, Chile

1
Francisco Melo

Profesor Titular

Genetica Molecular y Microbiologia

PONTIFICIA UNIVERSIDAD CATOLICA DE CHILE

Santiago, Chile

1
Juan Agustín Larraín

Profesor Titular

Biologia Celular y Molecular

PONTIFICIA UNIVERSIDAD CATÓLICA DE CHILE

Santiago, Chile

1
Carla Lozano

Profesora Asociada

Instituto de Investigación en Ciencias Odontológicas

Universidad de Chile

Santiago, Chile

1
Lilian Jara

Titular Professor

Human Molecular Genetic

UNIVERSIDAD DE CHILE / FACULTAD DE MEDICINA

Santiago, Chile

1
Ana Verónica Ortega Pinto Ortega

Associate Professor

Pathology and Oral Medicine

UNIVERSIDAD DE CHILE, FACULTAD DE ODONTOLOGÍA

Santiago, Chile

1
BLANCA URZÚA

Associate Professor

Institute for Research in Dental Sciences

Universidad de Chile

SANTIAGO, Chile

1
Leandro Zuñiga

Profesor Asociado

Medicine

Universidad de Talca

Talca, Chile

1
Diego Caamaño

1
Wendy Gonzalez

Director of the Center for Bioinformatics, Simulations and Modeling (CBSM)

Bioinformática

CENTRO DE BIOINFORMÁTICA Y SIMULACIÓN MOLECULAR (CBSM)/ UNIVERSIDAD DE TALCA

Talca, Chile

1
Constanza Aguilera

Docente investigadora

Universidad San Sebastián

Concepción, Chile

1
Jorge Valdes

I

CENTRO DE GENOMICA Y BIOINFORMATICA

UNIVERSIDAD MAYOR

Santiago, Chile

1
Harold Nuñez

PostDoc

FUNDACIÓN CIENCIA PARA LA VIDA

Santiago, Chile

1
Carolina Mascayano

Académico

Ciencias del Ambiente

UNIVERSIDAD DE SANTIAGO DE CHILE, FACULTAD DE QUÍMICA Y BIOLOGIA

santiago, Chile